File Format Readers

Format Supported Unsupported Partial Unknown/Missing
APLReader 16 0 0 135
APNGReader 13 0 0 138
AVIReader 13 0 0 138
AliconaReader 15 3 0 133
BMPReader 15 0 0 136
BioRadReader 16 18 0 117
DeltavisionReader 31 0 0 120
DicomReader 15 12 0 124
EPSReader 13 0 0 138
FEIReader 13 0 0 138
FV1000Reader 32 3 0 116
FitsReader 13 0 0 138
FlexReader 30 0 0 121
FluoviewReader 26 13 0 112
GIFReader 13 0 0 138
GatanReader 16 2 0 133
GelReader 22 0 0 129
ICSReader 19 12 0 120
IPLabReader 15 9 0 127
IPWReader 15 0 0 136
ImarisHDFReader 17 13 0 121
ImarisReader 20 4 0 127
ImarisTiffReader 25 0 0 126
ImprovisionTiffReader 22 0 0 129
InCellReader 20 0 0 131
JPEGReader 13 0 0 138
KhorosReader 13 0 0 138
L2DReader 13 0 0 138
LIFReader 28 0 0 123
LIMReader 13 0 0 138
LeicaReader 35 0 0 116
MINCReader 14 0 0 137
MNGReader 14 0 0 137
MRCReader 16 0 0 135
MetamorphReader 20 0 0 131
MetamorphTiffReader 25 0 0 126
MicromanagerReader 13 0 0 138
NAFReader 13 0 0 138
ND2Reader 18 16 0 117
NRRDReader 16 0 0 135
NikonReader 20 0 0 131
OMETiffReader 151 0 0 0
OMEXMLReader 151 0 0 0
OpenlabRawReader 14 0 0 137
OpenlabReader 18 2 0 131
PCIReader 15 0 0 136
PCXReader 13 0 0 138
PGMReader 13 0 0 138
PSDReader 13 0 0 138
PerkinElmerReader 23 4 0 124
PictReader 13 0 0 138
PrairieReader 16 3 0 132
QTReader 13 0 0 138
SDTReader 13 0 0 138
SEQReader 20 0 0 131
SVSReader 21 0 0 130
SlidebookReader 15 0 0 136
TCSReader 33 0 0 118
TiffReader 20 0 0 131
TillVisionReader 13 0 0 138
VisitechReader 14 0 0 137
ZeissLSMReader 40 0 0 111
ZeissZVIReader 45 0 0 106

Metadata Fields

Field Supported Unsupported Partial Unknown/Missing
Arc: Type 2 0 0 61
ChannelComponent: ColorDomain 2 0 0 61
ChannelComponent: Index 2 0 0 61
Detector: Gain 5 1 0 57
Detector: ID 2 1 0 60
Detector: Manufacturer 2 1 0 60
Detector: Model 3 1 0 59
Detector: Offset 7 1 0 55
Detector: SerialNumber 2 1 0 60
Detector: Type 2 1 0 60
Detector: Voltage 7 4 0 52
DetectorSettings: Detector 2 5 0 56
DetectorSettings: Gain 2 8 0 53
DetectorSettings: Offset 2 6 0 55
Dimensions: PhysicalSizeX 36 0 0 27
Dimensions: PhysicalSizeY 35 0 0 28
Dimensions: PhysicalSizeZ 19 0 0 44
Dimensions: TimeIncrement 9 0 0 54
Dimensions: WaveIncrement 6 0 0 57
Dimensions: WaveStart 5 0 0 58
DisplayOptions: ID 2 1 0 60
DisplayOptions: Zoom 2 1 0 60
DisplayOptionsProjection: ZStart 2 0 0 61
DisplayOptionsProjection: ZStop 2 0 0 61
DisplayOptionsTime: TStart 2 0 0 61
DisplayOptionsTime: TStop 2 0 0 61
Experimenter: Email 15 0 0 48
Experimenter: FirstName 16 0 0 47
Experimenter: ID 15 0 0 48
Experimenter: Institution 16 0 0 47
Experimenter: LastName 16 0 0 47
Filament: Type 2 0 0 61
Image: CreationDate 16 0 0 47
Image: Description 14 0 0 49
Image: ID 3 0 0 60
Image: InstrumentRef 3 0 0 60
Image: Name 15 0 0 48
ImagingEnvironment: AirPressure 2 0 0 61
ImagingEnvironment: CO2Percent 2 0 0 61
ImagingEnvironment: Humidity 2 0 0 61
ImagingEnvironment: Temperature 3 0 0 60
Instrument: ID 2 0 0 61
Laser: FrequencyMultiplication 2 0 0 61
Laser: LaserMedium 4 0 0 59
Laser: Pulse 2 0 0 61
Laser: Tuneable 2 0 0 61
Laser: Type 3 0 0 60
Laser: Wavelength 6 0 0 57
LightSource: ID 2 0 0 61
LightSource: Manufacturer 2 0 0 61
LightSource: Model 2 0 0 61
LightSource: Power 2 0 0 61
LightSource: SerialNumber 2 0 0 61
LightSourceSettings: Attenuation 2 0 0 61
LightSourceSettings: LightSource 2 0 0 61
LightSourceSettings: Wavelength 2 0 0 61
LogicalChannel: ContrastMethod 4 5 0 54
LogicalChannel: EmWave 12 5 0 46
LogicalChannel: ExWave 12 5 0 46
LogicalChannel: Fluor 4 5 0 54
LogicalChannel: ID 4 5 0 54
LogicalChannel: IlluminationType 5 5 0 53
LogicalChannel: Mode 4 5 0 54
LogicalChannel: Name 11 5 0 47
LogicalChannel: NdFilter 5 5 0 53
LogicalChannel: PhotometricInterpretation 4 5 0 54
LogicalChannel: PinholeSize 5 5 0 53
LogicalChannel: PockelCellSetting 4 5 0 54
LogicalChannel: SamplesPerPixel 63 5 0 0
OTF: ID 2 0 0 61
OTF: OpticalAxisAveraged 2 0 0 61
OTF: PixelType 2 0 0 61
OTF: SizeX 2 0 0 61
OTF: SizeY 2 0 0 61
Objective: CalibratedMagnification 3 6 0 54
Objective: Correction 3 0 0 60
Objective: ID 3 0 0 60
Objective: Immersion 3 0 0 60
Objective: LensNA 9 1 0 53
Objective: Manufacturer 3 1 0 59
Objective: Model 7 0 0 56
Objective: NominalMagnification 4 0 0 59
Objective: SerialNumber 3 0 0 60
Objective: WorkingDistance 4 1 0 58
Pixels: BigEndian 63 0 0 0
Pixels: DimensionOrder 63 0 0 0
Pixels: ID 63 0 0 0
Pixels: PixelType 63 0 0 0
Pixels: SizeC 63 0 0 0
Pixels: SizeT 63 0 0 0
Pixels: SizeX 63 0 0 0
Pixels: SizeY 63 0 0 0
Pixels: SizeZ 63 0 0 0
Plane: TheC 63 0 0 0
Plane: TheT 63 0 0 0
Plane: TheZ 63 0 0 0
PlaneTiming: DeltaT 12 0 0 51
PlaneTiming: ExposureTime 8 0 0 55
Plate: Description 2 0 0 61
Plate: ExternalIdentifier 2 0 0 61
Plate: ID 2 0 0 61
Plate: Name 3 0 0 60
Plate: Status 2 0 0 61
PlateRef: ID 2 0 0 61
ROI: ID 2 1 0 60
ROI: T0 2 1 0 60
ROI: T1 2 1 0 60
ROI: X0 2 1 0 60
ROI: X1 2 1 0 60
ROI: Y0 2 1 0 60
ROI: Y1 2 1 0 60
ROI: Z0 2 1 0 60
ROI: Z1 2 1 0 60
Reagent: Description 2 0 0 61
Reagent: ID 2 0 0 61
Reagent: Name 2 0 0 61
Reagent: ReagentIdentifier 2 0 0 61
Screen: ID 2 0 0 61
Screen: Name 2 0 0 61
Screen: ProtocolDescription 2 0 0 61
Screen: ProtocolIdentifier 2 0 0 61
Screen: ReagentSetDescription 2 0 0 61
Screen: Type 2 0 0 61
ScreenAcquisition: EndTime 2 0 0 61
ScreenAcquisition: ID 2 0 0 61
ScreenAcquisition: StartTime 2 0 0 61
StageLabel: Name 2 1 0 60
StageLabel: X 2 1 0 60
StageLabel: Y 2 1 0 60
StageLabel: Z 2 1 0 60
StagePosition: PositionX 9 0 0 54
StagePosition: PositionY 9 0 0 54
StagePosition: PositionZ 8 0 0 55
TiffData: FileName 2 0 0 61
TiffData: FirstC 2 0 0 61
TiffData: FirstT 2 0 0 61
TiffData: FirstZ 2 0 0 61
TiffData: IFD 2 0 0 61
TiffData: NumPlanes 2 0 0 61
TiffData: UUID 2 0 0 61
Well: Column 3 0 0 60
Well: ExternalDescription 2 0 0 61
Well: ExternalIdentifier 2 0 0 61
Well: ID 2 0 0 61
Well: Row 3 0 0 60
Well: Type 2 0 0 61
WellSample: ID 2 0 0 61
WellSample: Index 3 0 0 60
WellSample: PosX 2 0 0 61
WellSample: PosY 2 0 0 61
WellSample: Timepoint 2 0 0 61